image: (a) Schematic of IHoM and IHeM models. NC: neutral cells; AC: cells carrying antigen mutations; IC: immune-recognizable cells; EC: immune-escaped cells. (b) Response of IHoM and IHeM to monotherapies with chemotherapy or immune checkpoint blockade. (c) Changes in Shannon diversity of antigen mutations in IHeM before and after chemotherapy and responses under combination therapy.
Credit: Chen S, Hu Z, Zhou D
The efficacy of immunotherapy varies significantly across different tumor types, and antigen heterogeneity has emerged as a key factor determining treatment outcomes. Tumors with high immunogenicity and a high mutational burden typically elicit strong immune responses and respond well to immune checkpoint blockade (ICB); however, when immunogenic subpopulations are limited, immune recognition and clearance are often restricted. Intratumoral antigen heterogeneity not only weakens immune surveillance but also leads to chemotherapy resistance, posing a major challenge in cancer treatment. In recent years, chemo-immunotherapy combination strategies have been considered effective for overcoming the impact of heterogeneity. While chemotherapy has traditionally been viewed as immunosuppressive, increasing evidence indicates that it can also stimulate the immune system by releasing tumor antigens and remodeling the tumor microenvironment. Nevertheless, the synergistic mechanisms of chemotherapy and immunotherapy in antigen-heterogeneous tumors remain poorly understood. Existing mathematical models have revealed some aspects of tumor-immune dynamics but largely neglect neoantigen diversity and its dynamic evolution under treatment.
Recently, an article titled “Modeling Combination Chemo-Immunotherapy for Heterogeneous Tumors” in Quantitative Biology, establishing a quantitative modeling framework to elucidate how antigen heterogeneity, immune selection, and chemotherapy jointly determine tumor evolution and therapeutic outcomes.
As shown in Figure 1, the team proposed two models to simulate tumor responses under conditions of immune homogeneity (IHoM) and heterogeneity (IHeM). Both stochastic and deterministic models were constructed to simulate the dynamic evolution of IHoM and IHeM tumors under immunotherapy and chemotherapy. Results showed that the two tumor types exhibited markedly different responses to immunotherapy: homogeneous tumors were more sensitive, whereas heterogeneous tumors displayed significant treatment tolerance. On the other hand, chemotherapy suppressed both tumor types, but relapse patterns differed.
Further analysis revealed that chemotherapy significantly reduced antigen mutations and antigen diversity features in heterogeneous tumor models. This finding suggests that chemotherapy not only directly kills tumor cells but may also indirectly improve the immune microenvironment by decreasing antigen heterogeneity. Based on this mechanism, the team emphasized the critical role of immune system recovery in combination therapy. They ultimately recommended a sequential treatment strategy in clinical design, with chemotherapy administered first followed by immunotherapy, to fully leverage chemotherapy-induced remodeling of the tumor immune microenvironment and enhance overall treatment efficacy.
Key Findings
Chemotherapy reduces antigen heterogeneity and improves the immune microenvironment:
The mathematical models explored the role of tumor antigen heterogeneity in combination chemo-immunotherapy. Model results indicate that when antigen heterogeneity is high, monotherapy with immunotherapy is often insufficient. Chemotherapy reduces sensitive cell populations and antigen diversity, making residual cells more susceptible to immune recognition and clearance. Thus, chemotherapy not only directly kills tumor cells but also acts as an immunological priming strategy, creating favorable conditions for combination therapy.
Immune system recovery is critical for combination therapy efficacy:
Even if chemotherapy reduces antigen heterogeneity, the benefits of combination therapy remain limited if the immune system has not recovered to an effective level. Low-dose chemotherapy combined with moderate ICB achieves favorable outcomes, highlighting that coordination between immune status and treatment timing is a key determinant of efficacy.
Combination therapy outperforms monotherapy, and treatment should consider dynamic evolution:
The model compared monotherapy with chemotherapy, monotherapy with immunotherapy, and combination therapy. Results showed that combination strategies significantly delay resistance and promote immune clearance. The study emphasized that treatment should be considered a dynamic process, accounting for tumor heterogeneity evolution and timing of immune recovery. Based on chemotherapy’s impact on immune heterogeneity and immune recovery, the authors proposed an alternating dosing scheme, recommending chemotherapy first followed by immunotherapy.
Future Applications:
This study provides a theoretical foundation for designing more effective chemo-immunotherapy regimens. Future strategies could monitor immune recovery status to identify optimal timing for initiating immunotherapy post-chemotherapy and optimize individualized treatment based on tumor antigen heterogeneity and immune parameters. The model can also be extended to evaluate sensitivity to dosage intensity, chemotherapy-immunotherapy intervals, and individual immune variations, guiding precise decisions on dosing and timing. Furthermore, incorporating such models into clinical trial design may reduce failure rates, improve resource utilization, and enable truly model-driven “digital treatment optimization.” The framework also offers new perspectives for studying immune resistance, antigen escape, and digital twin-based therapy optimization, with broad potential in precision oncology. More broadly, it can serve as a foundation for developing individualized tumor-immune system digital twin models to support precise prediction and real-time optimization of clinical treatment strategies.
Journal
Quantitative Biology
DOI
Method of Research
Experimental study
Subject of Research
Not applicable
Article Title
Modeling combination chemo-immunotherapy for heterogeneous tumors
Article Publication Date
2-Apr-2025