Global DNA-methylation is affected in G- cells. (IMAGE)

Nanjing Agricultural University The Academy of Science

Global DNA-methylation is affected in G- cells.

Caption

Global DNA-methylation is affected in G- cells. Global methylation level analysis in G− and G+ condition. (A) Bart chart representing the methylation level of individual sample (y-axis, 1 = 100%) in the three-cytosine sequence context (x-axis). (B, C) Cytosine methylation profiles within and 2 kb up- and downstream of (B) genes coding sequence and (C) of TE. (D) Differentially Methylated Cytosines (DMCs) and Differentially Methylated Regions (DMRs) and their contexts in G− condition compared to G+. Grey bar chart represents the total number of DMC/DMRs identified. Methylation changes are represented in black when methylation increases in G− compared to G+ cells (Hyperme) and in light grey when methylation decreases in G− compared to G+ cells (Hypome). Number of DMCs and DMRs are indicated on the top/bottom of each barchart. (E) Localization of identified DMRs in specific genomic features. Black and white pie charts represent the proportion of hyper-(black) and hypo-(white) methylated of identified DMRs (number underneath) in each sequence context. TE: extragenic transposable elements; TE-intron: intronic transposable elements; TE-promoter; transposable element found within promoter sequence.

Credit

Horticulture Research

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